Network¶

class neuron3d.Network(spikefile='')¶

display()¶

Plot background field

plot_points(x, y, z, spikes=[], t=0, color=(0.5, 0.5, 0.5), csize=0.013333333333333334)¶

Plot spheres representing each node in network

read_file_to_vector(file_name, spike_ids=None)¶

Read the spike data formatted from NEURON where each line is a timestamp of spike followed by a cell (or other spike generator) id that gave the spike.

Parameters:	file_name – Name of the spike file to read. spike_ids – If specified, a subset of ids to load. This should be an sorted-ascending list.
Returns:	The data in a vector of tuples of the format (time, gid).